Nanos tabletop SEM with integrated EDS Analysis: Adding Chemical Insight to Electron Microscopy

Blog Post

Tabletop SEM Nanos with integrated EDS
Post publication date: 
Thursday, July 9, 2026

In material analysis, seeing the surface of a sample is often only the first step. A tabletop SEM allows laboratories to observe morphology, topography, defects, particles, coatings, and microstructural features at high magnification. But to fully understand a material, it is often necessary to go beyond the image and identify what the sample is made of.

This is where EDS comes in.

EDS, or Energy Dispersive X-ray Spectroscopy, complements SEM imaging by adding chemical information to morphological observations. In other words, SEM helps users see what a sample looks like, while EDS helps them understand its elemental composition.

The real value lies in the synergy between the two techniques. SEM provides high-resolution morphological and topographical data, while EDS adds localized chemical information to the features observed in the image. Together, they make it possible to correlate specific microstructural features with their composition.

See the Semplor Nanos EDS workflow in action: from SEM imaging to elemental analysis.

What is EDS?
EDS spectrum for elemental analysis with Semplor Nanos tabletop SEM

EDS stands for Energy Dispersive X-ray Spectroscopy. It is an analytical technique used together with SEM to identify the chemical elements present in a sample.

During analysis, the electron beam of the SEM interacts with the atoms in the material. This interaction generates different signals, each carrying different types of information. Secondary electrons are mainly used to reveal surface morphology and shape, while backscattered electrons can highlight contrast related to atomic number and material composition. Characteristic X-rays, generated from the interaction volume within the sample, are the signals used by EDS for elemental analysis.

The origin of these X-rays is linked to the atomic structure of the elements in the sample. When the primary electron beam interacts with an atom, it can disturb electrons in the inner shells. As the atom returns to a more stable state, energy is released in the form of an X-ray. The energy of this X-ray is characteristic of the element that produced it, which is why EDS can be used to identify chemical composition.

These X-ray signals are collected by the EDS detector and converted into a spectrum. By reading this spectrum, it is possible to identify the elements present and, in some cases, evaluate their distribution or relative concentration.

In simple terms, while a compact SEM allows users to observe the morphology of a sample, EDS adds another essential layer of information: chemical composition.

What can you do with a compact SEM equipped with EDS?
SEM image, elemental maps, spectrum, and quantification in the same software environment.

The integration of SEM and EDS enables several types of analysis, making it useful for industrial laboratories, research facilities, and quality control departments.

By combining the SEM image with EDS data, users can move from visual inspection to material understanding. A feature that appears brighter, darker, layered, contaminated, fractured, or structurally different in the SEM image can be investigated further to understand whether it also has a different elemental composition.

A typical workflow starts from the SEM image. The operator identifies a region of interest directly on the sample image — for example a particle, inclusion, coating, defect, or contamination — and then acquires EDS data from that specific point or area. This makes the analysis intuitive: first you observe the morphology, then you investigate the chemistry of the selected feature.

Depending on the analytical question, the operator can acquire a spectrum from a single point, analyze a wider area, map the distribution of elements, or draw a line across the sample to visualize how composition changes along a selected path.

Core EDS workflows
EDS spectrum and quantification on Semplor Nanos tabletop SEM software

EDS spectra

An EDS spectrum is one of the core outputs of SEM-EDS analysis. It displays the X-ray signals collected from the analyzed area, with peaks corresponding to the elements detected in the sample. Each peak is linked to a characteristic X-ray energy, allowing the software to identify which elements are present.

Beyond simple identification, the spectrum can also support quantitative or semi-quantitative evaluation, helping users estimate the relative amount of each element in the analyzed area. This makes spectra an important first step for understanding the chemical composition of a material, confirming the presence of specific elements, or investigating unexpected contamination.

Point and area analysis

Point and area analysis allows users to select a specific point or region on the SEM image and identify its elemental composition. It is useful for analyzing inclusions, particles, contamination, localized defects, or specific areas of interest.

This workflow is particularly valuable when a feature visible in the SEM image needs to be identified chemically. For example, a small particle, a bright inclusion, or an unexpected deposit can be selected and analyzed to understand which elements are present.

Line scans

A line scan shows how elemental composition changes along a selected line on the SEM image. The operator draws a line across a feature of interest — for example an interface, a particle, a coating, a layered structure, or a transition between two different phases — and the EDS software displays how the detected elements vary along that path.

This workflow is especially useful for studying interfaces, coatings, layers, joints, diffusion zones, inclusions, and transitions between different materials. It helps users understand not only which elements are present, but also how their distribution changes from one region to another.

Elemental mapping

EDS mapping, also known as region mapping, shows how chemical elements are distributed across a selected area of the sample. Instead of analyzing only one point or one line, the operator selects a region of interest and the software generates individual elemental maps, as well as a combined map where different elements can be displayed with different colors.

This workflow is particularly useful for comparing different regions, checking material homogeneity, identifying phases, detecting contamination, and understanding how elements are distributed within complex microstructures. When the elemental map is compared or overlaid with the SEM or BSD image, it becomes easier to connect what is visible in the image with the chemical composition of each area.

For example, particles, inclusions, coatings, grains, or different phases that appear with different contrast in the SEM image can be investigated chemically, helping users understand whether visual differences also correspond to compositional differences.

EDS capabilities on the Semplor Nanos compact SEM
Tabletop SEM Semplor Nanos with EDS spectrum analysis software

The Semplor Nanos compact SEM is equipped with an integrated EDS system designed to support routine elemental analysis directly from the SEM workflow. This makes it possible to combine high-resolution imaging and chemical analysis in a compact, laboratory-friendly platform, without turning the instrument into a complex, large-scale analytical setup.

The EDS system is integrated into the Nanos architecture, helping users keep the benefits of a tabletop SEM: compact footprint, practical operation, and direct access to both imaging and elemental analysis from the same instrument.

The EDS hardware is based on a Silicon Drift Detector (SDD) with a 30 mm² active area, supporting high count rates and efficient X-ray collection. With up to 300,000 counts per second and an energy resolution of < 132 eV at Mn Kα, the system is designed to provide reliable elemental identification for a wide range of materials.

The detector can identify elements from boron (Z=5) to americium (Z=95), enabling analysis across many industrial and research applications. This broad elemental range makes the system suitable for investigating metals, ceramics, coatings, particles, contamination, inclusions, and many other sample types.

On the software side, the Nanos EDS system supports the main analytical workflows used in SEM-EDS analysis, including point and area analysis, line scanning, and elemental mapping.

Depending on the application, the Nanos EDS configuration can be selected to support routine elemental analysis or to improve performance for more demanding tasks, such as the detection of light elements. For laboratories working with materials where elements such as nitrogen are relevant, the detector window option can be an important factor in achieving clearer and more reliable spectra.

These capabilities help turn the tabletop SEM from a pure imaging tool into a compact analytical platform for material characterization, quality control, and failure analysis.

Why proper instrument setup matters
Sample loading in Semplor Nanos tabletop SEM for EDS analysis

The quality of EDS data depends not only on the detector, but also on correct SEM configuration. In the case of the Semplor Nanos compact SEM, the Nanos EDS detector and the proper instrument setup play an important role in obtaining reliable analytical results.

One of the key factors in SEM-EDS analysis is geometry. For efficient X-ray collection, the sample should be positioned correctly in relation to the electron beam and the EDS detector. In practical terms, this means working with the appropriate working distance, keeping the sample as flat as possible, and avoiding unnecessary stage tilt during EDS acquisition.

A specific advantage of the Semplor Nanos tabletop SEM is its single working distance of 10 mm. This allows users to acquire excellent SEM images and collect EDS data at the same working distance, simplifying the workflow and helping maintain the proper geometry for efficient X-ray collection.

Another important parameter is the accelerating voltage. The primary electron beam does not interact only with the surface, but with a volume of material beneath it. The depth and size of this interaction volume depend on the accelerating voltage and on the atomic number or weight of the sample. Higher accelerating voltages generally increase beam penetration and may generate X-rays from a larger volume of material.

This means that SEM-EDS analysis is not only about detecting which elements are present, but also about understanding where the signal is coming from. Choosing the right conditions helps obtain data that is more representative of the area of interest.

Parameters such as working distance, sample geometry, accelerating voltage, material type, and sample preparation can significantly influence the result. A proper setup helps generate more reliable spectra, clearer elemental maps, and more accurate interpretation. On the other hand, non-optimized settings may produce data that is harder to read or may lead to incorrect conclusions.

Understanding EDS limitations and detector configuration

EDS is a powerful technique, but correct interpretation requires awareness of its limitations. An EDS spectrum is not simply a list of elements: it is a signal that must be read in the right analytical context.

One important aspect is the detection of light elements. Elements such as nitrogen generate low-energy X-rays, which are more difficult to transmit and detect accurately than higher-energy signals from heavier elements. For this reason, light element analysis can be more challenging and depends strongly on detector configuration, acquisition conditions, and sample characteristics.

The EDS detector window plays an important role in this process. Standard window configurations provide excellent transmission for the majority of elements, making them suitable for many routine applications. However, when the application requires improved detection of light elements, an ultra-thin window option can significantly increase the transmission of low-energy X-rays, including signals from elements such as nitrogen.

This can make a clear difference in the resulting spectrum. While heavier elements may be detected effectively with different configurations, light elements can appear much more clearly when the detector window is optimized for low-energy X-ray transmission. This is why detector configuration should be selected according to the materials being analyzed and the elements of interest.

Spectrum artifacts: why interpretation matters

Some peaks in the spectrum may be caused by artifacts rather than by elements actually present in the analyzed area. For example, sum peaks can occur when two X-rays reach the detector almost simultaneously and are recorded as a single event with an energy equal to the sum of the two incoming X-rays. As a result, an additional peak may appear in the spectrum, even though it does not necessarily correspond to a real element in the sample.

Another example is the presence of escape peaks. These can occur inside the detector when part of the incoming X-ray energy is not fully collected, producing a smaller peak at a lower energy than the original signal. If not recognized, this type of artifact can also complicate spectrum interpretation.

This is why experience, correct setup, and suitable software tools are essential for reliable SEM-EDS analysis. Recognizing limitations, selecting the appropriate detector configuration, and understanding spectrum artifacts help avoid misinterpretation and support more accurate conclusions about the sample composition.

Where is EDS useful?
Tabletop SEM EDS report with elemental maps and chemical analysis results

EDS can support a wide range of applications, including:

  • analysis of metals, alloys, and surface treatments;
  • identification of contamination and foreign particles;
  • investigation of fractures, defects, and inclusions;
  • characterization of ceramics, polymers, and composite materials;
  • analysis of coatings, deposits, and thin layers;
  • production quality control;
  • research and development activities;
  • failure analysis of damaged components.

Thanks to compact systems such as the Semplor Nanos tabletop SEM, these analyses can be performed more directly and conveniently, even in laboratories without large, dedicated electron microscopy facilities.

Key factors for reliable EDS results

To obtain useful and reliable EDS data, several factors should be considered. Sample position and geometry are essential: a flat sample, properly positioned at the correct working distance, helps improve X-ray collection efficiency and data quality.

It is also important to remember that X-rays can be generated from a volume of material that may extend over a region of several microns, depending on the material and beam settings. This means that EDS results must always be interpreted in relation to the size of the feature being analyzed and the interaction volume of the electron beam.

Correct beam settings are another important part of the workflow. The goal is to choose conditions that provide the chemical information needed while maintaining stable and efficient acquisition. In practice, this means balancing image quality, X-ray signal, acquisition speed, and analytical accuracy.

Spectrum interpretation also requires attention. Artifacts such as sum peaks and escape peaks can appear in the spectrum and may affect the identification of elements if they are not recognized correctly. For this reason, EDS analysis benefits from both suitable software tools and proper analytical know-how.

For elemental maps, acquisition conditions influence the level of detail and reliability of the result. Live EDS maps are useful for obtaining a quick overview of elemental distribution, while higher-quality map acquisitions can be used when more detailed chemical information is required.

Finally, for applications involving light elements such as nitrogen, the detector window configuration becomes especially important. An ultra-thin EDS window can improve low-energy X-ray transmission, making it a valuable option for laboratories interested in nitrogen analysis or other light-element applications.

Want to learn more about the Semplor Nanos tabletop SEM?
Semplor Nanos tabletop SEM with EDS spectrum analysis software

Schaefer SEE distributes the Semplor Nanos tabletop SEM, a compact solution designed to bring electron microscopy and material analysis directly into the laboratory.

With its integrated EDS capabilities, Nanos allows users to combine SEM imaging with elemental analysis, supporting workflows such as spectra, point and area analysis, line scans, and elemental maps. Depending on the application, the EDS configuration can be selected to support routine elemental analysis or more specific needs, such as improved detection of light elements.

To learn more about the potential of a tabletop SEM with EDS, understand whether this technology is suitable for your applications, or receive additional information about the Nanos system, contact us: our team is available to discuss your needs and help you identify the most suitable solution.

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Nanos - The next generation tabletop SEM
The next generation tabletop SEM with integrated EDS

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